Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ddx58Q6Q899 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Gm6659-201ENSMUST00000174752 547 ntBASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx58Q6Q899 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx58Q6Q899 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Gm17661-201ENSMUST00000170317 270 ntBASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx58Q6Q899 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Gm10013-201ENSMUST00000106074 672 ntBASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx58Q6Q899 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx58Q6Q899 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Gm13474-201ENSMUST00000122466 815 ntBASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx58Q6Q899 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx58Q6Q899 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.64■■□□□ 1.06
Ddx58Q6Q899 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx58Q6Q899 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.64■■□□□ 1.05
Ddx58Q6Q899 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx58Q6Q899 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx58Q6Q899 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ddx58Q6Q899 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms