Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Gm7860-201ENSMUST00000121190 879 ntBASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.63■□□□□ 0.25
Rnf220Q6PDX6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Gm12821-201ENSMUST00000120022 600 ntBASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.62■□□□□ 0.25
Rnf220Q6PDX6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rnf220Q6PDX6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf220Q6PDX6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rnf220Q6PDX6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf220Q6PDX6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf220Q6PDX6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf220Q6PDX6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.58■□□□□ 0.25
Rnf220Q6PDX6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
Rnf220Q6PDX6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rnf220Q6PDX6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 Gm27454-201ENSMUST00000185090 204 ntBASIC16.58■□□□□ 0.24
Rnf220Q6PDX6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms