Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Herc4Q6PAV2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Herc4Q6PAV2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Herc4Q6PAV2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Herc4Q6PAV2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Gm8969-201ENSMUST00000199694 526 ntBASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Herc4Q6PAV2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Gm6576-201ENSMUST00000169678 883 ntBASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Herc4Q6PAV2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Herc4Q6PAV2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Gm13168-201ENSMUST00000121771 632 ntBASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Gm15378-201ENSMUST00000121894 207 ntBASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Gm37292-201ENSMUST00000192062 758 ntBASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Herc4Q6PAV2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Gm10698-201ENSMUST00000182663 604 ntBASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Herc4Q6PAV2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Herc4Q6PAV2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.33■□□□□ 0.69
Herc4Q6PAV2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Herc4Q6PAV2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Herc4Q6PAV2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Herc4Q6PAV2 Gm27011-201ENSMUST00000182352 972 ntBASIC19.33■□□□□ 0.68
Herc4Q6PAV2 Gm43183-201ENSMUST00000200632 547 ntBASIC19.33■□□□□ 0.68
Herc4Q6PAV2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Herc4Q6PAV2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Herc4Q6PAV2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.33■□□□□ 0.68
Herc4Q6PAV2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Herc4Q6PAV2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Herc4Q6PAV2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Herc4Q6PAV2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms