Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.58■□□□□ 0.25
Snrnp200Q6P4T2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp200Q6P4T2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp200Q6P4T2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp200Q6P4T2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Gm37025-201ENSMUST00000195159 829 ntBASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.58■□□□□ 0.24
Snrnp200Q6P4T2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp200Q6P4T2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp200Q6P4T2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Gm13559-201ENSMUST00000120476 863 ntBASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Snrnp200Q6P4T2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Gm6433-201ENSMUST00000118634 875 ntBASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp200Q6P4T2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Snrnp200Q6P4T2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms