Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt39Q6IFX4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt39Q6IFX4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Krt39Q6IFX4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Krt39Q6IFX4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Krt39Q6IFX4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Krt39Q6IFX4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Krt39Q6IFX4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt39Q6IFX4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt39Q6IFX4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.39■□□□□ 0.69
Krt39Q6IFX4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.39■□□□□ 0.69
Krt39Q6IFX4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Krt39Q6IFX4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt39Q6IFX4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Krt39Q6IFX4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt39Q6IFX4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt39Q6IFX4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Krt39Q6IFX4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.37■□□□□ 0.69
Krt39Q6IFX4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Gm2399-201ENSMUST00000104944 225 ntBASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Gm29791-202ENSMUST00000207888 369 ntBASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt39Q6IFX4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.36■□□□□ 0.69
Krt39Q6IFX4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Gm6211-202ENSMUST00000167849 925 ntBASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Mir8112-201ENSMUST00000184382 131 ntBASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Krt39Q6IFX4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Gm10602-201ENSMUST00000098239 609 ntBASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Krt39Q6IFX4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Gm12933-201ENSMUST00000120203 872 ntBASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Zfp783-201ENSMUST00000095946 670 ntBASIC19.34■□□□□ 0.69
Krt39Q6IFX4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt39Q6IFX4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Krt39Q6IFX4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt39Q6IFX4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms