Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.93■□□□□ 0.46
Cep290Q6A078 Gm12350-201ENSMUST00000121208 462 ntBASIC17.93■□□□□ 0.46
Cep290Q6A078 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cep290Q6A078 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.93■□□□□ 0.46
Cep290Q6A078 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.93■□□□□ 0.46
Cep290Q6A078 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cep290Q6A078 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cep290Q6A078 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cep290Q6A078 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cep290Q6A078 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cep290Q6A078 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cep290Q6A078 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cep290Q6A078 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cep290Q6A078 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cep290Q6A078 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cep290Q6A078 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cep290Q6A078 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cep290Q6A078 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cep290Q6A078 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cep290Q6A078 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.92■□□□□ 0.46
Cep290Q6A078 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cep290Q6A078 Gm15467-201ENSMUST00000120582 445 ntBASIC17.92■□□□□ 0.46
Cep290Q6A078 Gm15372-201ENSMUST00000120729 834 ntBASIC17.92■□□□□ 0.46
Cep290Q6A078 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cep290Q6A078 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cep290Q6A078 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Cep290Q6A078 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Cep290Q6A078 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cep290Q6A078 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cep290Q6A078 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.91■□□□□ 0.46
Cep290Q6A078 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.91■□□□□ 0.46
Cep290Q6A078 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cep290Q6A078 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.9■□□□□ 0.46
Cep290Q6A078 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44357-201ENSMUST00000195897 142 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm19658-201ENSMUST00000196231 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44367-201ENSMUST00000196836 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44350-201ENSMUST00000197197 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44390-201ENSMUST00000197533 144 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44313-201ENSMUST00000198018 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44486-201ENSMUST00000198508 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44454-201ENSMUST00000198541 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44314-201ENSMUST00000199263 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44394-201ENSMUST00000199558 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44484-201ENSMUST00000199873 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44466-201ENSMUST00000200264 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm44359-201ENSMUST00000200671 138 ntBASIC17.9■□□□□ 0.46
Cep290Q6A078 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.9■□□□□ 0.46
Cep290Q6A078 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.9■□□□□ 0.46
Cep290Q6A078 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.9■□□□□ 0.46
Cep290Q6A078 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.9■□□□□ 0.46
Cep290Q6A078 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cep290Q6A078 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cep290Q6A078 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cep290Q6A078 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cep290Q6A078 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cep290Q6A078 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cep290Q6A078 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cep290Q6A078 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Cep290Q6A078 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cep290Q6A078 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.89■□□□□ 0.45
Cep290Q6A078 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cep290Q6A078 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cep290Q6A078 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Cep290Q6A078 Gm10576-201ENSMUST00000191927 825 ntBASIC17.89■□□□□ 0.45
Cep290Q6A078 Gm6376-201ENSMUST00000209407 580 ntBASIC17.89■□□□□ 0.45
Cep290Q6A078 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cep290Q6A078 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cep290Q6A078 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cep290Q6A078 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cep290Q6A078 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.88■□□□□ 0.45
Cep290Q6A078 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cep290Q6A078 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms