Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ltn1Q6A009 Gm24589-201ENSMUST00000116692 94 ntBASIC20.83■□□□□ 0.93
Ltn1Q6A009 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.83■□□□□ 0.93
Ltn1Q6A009 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.83■□□□□ 0.93
Ltn1Q6A009 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ltn1Q6A009 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ltn1Q6A009 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.83■□□□□ 0.93
Ltn1Q6A009 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ltn1Q6A009 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Ltn1Q6A009 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ltn1Q6A009 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Mir3081-201ENSMUST00000175305 84 ntBASIC20.82■□□□□ 0.92
Ltn1Q6A009 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.82■□□□□ 0.92
Ltn1Q6A009 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ltn1Q6A009 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.82■□□□□ 0.92
Ltn1Q6A009 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Gm26039-201ENSMUST00000158152 144 ntBASIC20.81■□□□□ 0.92
Ltn1Q6A009 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ltn1Q6A009 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ltn1Q6A009 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ltn1Q6A009 Gm18115-201ENSMUST00000221209 621 ntBASIC20.8■□□□□ 0.92
Ltn1Q6A009 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.79■□□□□ 0.92
Ltn1Q6A009 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ltn1Q6A009 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ltn1Q6A009 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ltn1Q6A009 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ltn1Q6A009 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ltn1Q6A009 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ltn1Q6A009 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ltn1Q6A009 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.79■□□□□ 0.92
Ltn1Q6A009 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.79■□□□□ 0.92
Ltn1Q6A009 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ltn1Q6A009 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.79■□□□□ 0.92
Ltn1Q6A009 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.78■□□□□ 0.92
Ltn1Q6A009 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.78■□□□□ 0.92
Ltn1Q6A009 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ltn1Q6A009 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ltn1Q6A009 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.77■□□□□ 0.91
Ltn1Q6A009 Mzt1-203ENSMUST00000227948 952 ntBASIC20.77■□□□□ 0.91
Ltn1Q6A009 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ltn1Q6A009 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ltn1Q6A009 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.76■□□□□ 0.91
Ltn1Q6A009 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ltn1Q6A009 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ltn1Q6A009 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms