Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC9.98□□□□□ -0.81
Sox16Q62247 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sox16Q62247 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sox16Q62247 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC9.97□□□□□ -0.81
Sox16Q62247 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC9.97□□□□□ -0.81
Sox16Q62247 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Sox16Q62247 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC9.97□□□□□ -0.81
Sox16Q62247 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Gm43213-201ENSMUST00000151866 1790 ntBASIC9.97□□□□□ -0.81
Sox16Q62247 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Sox16Q62247 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Sox16Q62247 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.97□□□□□ -0.81
Sox16Q62247 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 AC164107.1-201ENSMUST00000227730 2161 ntBASIC9.97□□□□□ -0.81
Sox16Q62247 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sox16Q62247 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
Sox16Q62247 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Sox16Q62247 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC9.96□□□□□ -0.81
Sox16Q62247 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
Sox16Q62247 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sox16Q62247 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Sox16Q62247 Gm25238-201ENSMUST00000174914 89 ntBASIC9.96□□□□□ -0.82
Sox16Q62247 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Sox16Q62247 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Gm7856-201ENSMUST00000117514 1493 ntBASIC9.96□□□□□ -0.82
Sox16Q62247 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Sox16Q62247 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Sox16Q62247 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sox16Q62247 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC9.96□□□□□ -0.82
Sox16Q62247 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Sox16Q62247 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Gm19430-201ENSMUST00000193847 2137 ntBASIC9.95□□□□□ -0.82
Sox16Q62247 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC9.95□□□□□ -0.82
Sox16Q62247 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Mypopos-202ENSMUST00000205975 2321 ntBASIC9.95□□□□□ -0.82
Sox16Q62247 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sox16Q62247 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.95□□□□□ -0.82
Sox16Q62247 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Sox16Q62247 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sox16Q62247 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms