Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ecm1Q61508 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Ecm1Q61508 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Ecm1Q61508 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ecm1Q61508 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ecm1Q61508 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ecm1Q61508 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.45■□□□□ 0.7
Ecm1Q61508 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ecm1Q61508 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ecm1Q61508 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ecm1Q61508 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ecm1Q61508 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ecm1Q61508 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ecm1Q61508 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ecm1Q61508 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ecm1Q61508 Idnk-204ENSMUST00000226010 1898 ntBASIC19.44■□□□□ 0.7
Ecm1Q61508 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ecm1Q61508 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.44■□□□□ 0.7
Ecm1Q61508 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.44■□□□□ 0.7
Ecm1Q61508 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ecm1Q61508 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.44■□□□□ 0.7
Ecm1Q61508 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ecm1Q61508 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ecm1Q61508 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ecm1Q61508 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ecm1Q61508 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.43■□□□□ 0.7
Ecm1Q61508 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ecm1Q61508 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ecm1Q61508 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ecm1Q61508 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ecm1Q61508 Fst-202ENSMUST00000223640 2612 ntBASIC19.43■□□□□ 0.7
Ecm1Q61508 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ecm1Q61508 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ecm1Q61508 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.43■□□□□ 0.7
Ecm1Q61508 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.43■□□□□ 0.7
Ecm1Q61508 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ecm1Q61508 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ecm1Q61508 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ecm1Q61508 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ecm1Q61508 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ecm1Q61508 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ecm1Q61508 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ecm1Q61508 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.42■□□□□ 0.7
Ecm1Q61508 Mir8112-201ENSMUST00000184382 131 ntBASIC19.42■□□□□ 0.7
Ecm1Q61508 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ecm1Q61508 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ecm1Q61508 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ecm1Q61508 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ecm1Q61508 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ecm1Q61508 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.42■□□□□ 0.7
Ecm1Q61508 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ecm1Q61508 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.42■□□□□ 0.7
Ecm1Q61508 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ecm1Q61508 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Ecm1Q61508 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ecm1Q61508 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ecm1Q61508 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ecm1Q61508 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ecm1Q61508 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ecm1Q61508 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ecm1Q61508 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ecm1Q61508 Gm37722-201ENSMUST00000193757 208 ntBASIC19.4■□□□□ 0.7
Ecm1Q61508 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ecm1Q61508 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ecm1Q61508 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ecm1Q61508 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ecm1Q61508 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms