Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcd1Q61466 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.28■□□□□ 0.52
Smarcd1Q61466 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcd1Q61466 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Smarcd1Q61466 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcd1Q61466 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcd1Q61466 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcd1Q61466 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcd1Q61466 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Smarcd1Q61466 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Smarcd1Q61466 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.27■□□□□ 0.51
Smarcd1Q61466 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcd1Q61466 Grk6-206ENSMUST00000224995 2971 ntBASIC18.27■□□□□ 0.51
Smarcd1Q61466 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcd1Q61466 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcd1Q61466 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Gm43799-201ENSMUST00000201845 579 ntBASIC18.26■□□□□ 0.51
Smarcd1Q61466 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.26■□□□□ 0.51
Smarcd1Q61466 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Smarcd1Q61466 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.25■□□□□ 0.51
Smarcd1Q61466 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.25■□□□□ 0.51
Smarcd1Q61466 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.25■□□□□ 0.51
Smarcd1Q61466 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Smarcd1Q61466 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd1Q61466 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smarcd1Q61466 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.24■□□□□ 0.51
Smarcd1Q61466 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Gm27463-201ENSMUST00000183569 57 ntBASIC18.24■□□□□ 0.51
Smarcd1Q61466 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smarcd1Q61466 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarcd1Q61466 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms