Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Zfp131-205ENSMUST00000223812 663 ntBASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Terc-201ENSMUST00000082862 423 ntBASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-1Q5R1I8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-1Q5R1I8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-1Q5R1I8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms