Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-3Q5R1E6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Rab3c-203ENSMUST00000224180 967 ntBASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav6-3Q5R1E6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-3Q5R1E6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-3Q5R1E6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trav6-3Q5R1E6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-3Q5R1E6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-3Q5R1E6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Gm13148-201ENSMUST00000118892 745 ntBASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-3Q5R1E6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Mir5133-201ENSMUST00000174955 77 ntBASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-3Q5R1E6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Trav6-3Q5R1E6 Gm11927-201ENSMUST00000118472 759 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms