Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Gm8000-201ENSMUST00000188378 592 ntBASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col27a1Q5QNQ9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col27a1Q5QNQ9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Gm12350-201ENSMUST00000121208 462 ntBASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col27a1Q5QNQ9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Gm5364-201ENSMUST00000216789 889 ntBASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col27a1Q5QNQ9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col27a1Q5QNQ9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.96■□□□□ 0.3
Col27a1Q5QNQ9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.96■□□□□ 0.3
Col27a1Q5QNQ9 Gm10060-201ENSMUST00000212002 111 ntBASIC16.96■□□□□ 0.3
Col27a1Q5QNQ9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col27a1Q5QNQ9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col27a1Q5QNQ9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col27a1Q5QNQ9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col27a1Q5QNQ9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col27a1Q5QNQ9 Gm5264-201ENSMUST00000190584 848 ntBASIC16.95■□□□□ 0.3
Col27a1Q5QNQ9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col27a1Q5QNQ9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col27a1Q5QNQ9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Col27a1Q5QNQ9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms