Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.18■□□□□ 0.66
Scarf1Q5ND28 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarf1Q5ND28 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.16■□□□□ 0.66
Scarf1Q5ND28 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarf1Q5ND28 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scarf1Q5ND28 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scarf1Q5ND28 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Gm15565-201ENSMUST00000118890 427 ntBASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scarf1Q5ND28 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scarf1Q5ND28 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Scarf1Q5ND28 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scarf1Q5ND28 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Scarf1Q5ND28 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC19.11■□□□□ 0.65
Scarf1Q5ND28 Gm8969-201ENSMUST00000199694 526 ntBASIC19.11■□□□□ 0.65
Scarf1Q5ND28 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scarf1Q5ND28 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms