Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps13aQ5H8C4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps13aQ5H8C4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps13aQ5H8C4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vps13aQ5H8C4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps13aQ5H8C4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps13aQ5H8C4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps13aQ5H8C4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Gm5364-201ENSMUST00000216789 889 ntBASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13aQ5H8C4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Gm4995-201ENSMUST00000117247 432 ntBASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13aQ5H8C4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Gm10052-201ENSMUST00000168019 960 ntBASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Gm7729-201ENSMUST00000050143 801 ntBASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Gm37722-201ENSMUST00000193757 208 ntBASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps13aQ5H8C4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps13aQ5H8C4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms