Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn2bQ56A07 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.36■□□□□ 0.37
Scn2bQ56A07 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn2bQ56A07 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn2bQ56A07 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.35■□□□□ 0.37
Scn2bQ56A07 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.35■□□□□ 0.37
Scn2bQ56A07 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn2bQ56A07 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Scn2bQ56A07 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn2bQ56A07 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn2bQ56A07 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
Scn2bQ56A07 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.34■□□□□ 0.37
Scn2bQ56A07 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.34■□□□□ 0.37
Scn2bQ56A07 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn2bQ56A07 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn2bQ56A07 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn2bQ56A07 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scn2bQ56A07 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn2bQ56A07 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn2bQ56A07 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn2bQ56A07 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn2bQ56A07 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scn2bQ56A07 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn2bQ56A07 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn2bQ56A07 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.33■□□□□ 0.36
Scn2bQ56A07 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.33■□□□□ 0.36
Scn2bQ56A07 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn2bQ56A07 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.33■□□□□ 0.36
Scn2bQ56A07 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn2bQ56A07 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn2bQ56A07 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn2bQ56A07 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Gm12441-201ENSMUST00000121806 588 ntBASIC17.32■□□□□ 0.36
Scn2bQ56A07 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Gm38285-201ENSMUST00000192928 922 ntBASIC17.32■□□□□ 0.36
Scn2bQ56A07 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.32■□□□□ 0.36
Scn2bQ56A07 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn2bQ56A07 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Rab3c-203ENSMUST00000224180 967 ntBASIC17.31■□□□□ 0.36
Scn2bQ56A07 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn2bQ56A07 Gm4968-201ENSMUST00000071458 858 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms