Protein–RNA interactions for Protein: Q499D0

Foxn3, Forkhead box protein N3, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn3Q499D0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxn3Q499D0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Foxn3Q499D0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.29■□□□□ 0.68
Foxn3Q499D0 Gm6576-201ENSMUST00000169678 883 ntBASIC19.29■□□□□ 0.68
Foxn3Q499D0 Gm42545-201ENSMUST00000202755 922 ntBASIC19.29■□□□□ 0.68
Foxn3Q499D0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.29■□□□□ 0.68
Foxn3Q499D0 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.29■□□□□ 0.68
Foxn3Q499D0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxn3Q499D0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxn3Q499D0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxn3Q499D0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxn3Q499D0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxn3Q499D0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxn3Q499D0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.29■□□□□ 0.68
Foxn3Q499D0 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.29■□□□□ 0.68
Foxn3Q499D0 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.29■□□□□ 0.68
Foxn3Q499D0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxn3Q499D0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxn3Q499D0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Foxn3Q499D0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.28■□□□□ 0.68
Foxn3Q499D0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Foxn3Q499D0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Foxn3Q499D0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxn3Q499D0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxn3Q499D0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.28■□□□□ 0.68
Foxn3Q499D0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Foxn3Q499D0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxn3Q499D0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxn3Q499D0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.27■□□□□ 0.68
Foxn3Q499D0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.27■□□□□ 0.68
Foxn3Q499D0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Foxn3Q499D0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxn3Q499D0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Foxn3Q499D0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.26■□□□□ 0.67
Foxn3Q499D0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.26■□□□□ 0.67
Foxn3Q499D0 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.26■□□□□ 0.67
Foxn3Q499D0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.26■□□□□ 0.67
Foxn3Q499D0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Foxn3Q499D0 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.25■□□□□ 0.67
Foxn3Q499D0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Gm37292-201ENSMUST00000192062 758 ntBASIC19.25■□□□□ 0.67
Foxn3Q499D0 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.25■□□□□ 0.67
Foxn3Q499D0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.25■□□□□ 0.67
Foxn3Q499D0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Foxn3Q499D0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Foxn3Q499D0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Foxn3Q499D0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms