Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Spg11Q3UHA3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.21■□□□□ 0.19
Spg11Q3UHA3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Spg11Q3UHA3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Spg11Q3UHA3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Spg11Q3UHA3 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.21■□□□□ 0.19
Spg11Q3UHA3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Spg11Q3UHA3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Spg11Q3UHA3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Spg11Q3UHA3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Gm9727-201ENSMUST00000161387 555 ntBASIC16.2■□□□□ 0.18
Spg11Q3UHA3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Spg11Q3UHA3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Gm27867-201ENSMUST00000184778 125 ntBASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Spg11Q3UHA3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Chchd1-203ENSMUST00000224633 557 ntBASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Spg11Q3UHA3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Gm14140-201ENSMUST00000119999 995 ntBASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Spg11Q3UHA3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.16■□□□□ 0.18
Spg11Q3UHA3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Gm12260-201ENSMUST00000122447 411 ntBASIC16.16■□□□□ 0.18
Spg11Q3UHA3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Spg11Q3UHA3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Spg11Q3UHA3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms