Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Gm11927-201ENSMUST00000118472 759 ntBASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Rab3c-203ENSMUST00000224180 967 ntBASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cul4aQ3TCH7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.42■□□□□ 0.54
Cul4aQ3TCH7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cul4aQ3TCH7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cul4aQ3TCH7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cul4aQ3TCH7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cul4aQ3TCH7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Cul4aQ3TCH7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cul4aQ3TCH7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cul4aQ3TCH7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cul4aQ3TCH7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cul4aQ3TCH7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cul4aQ3TCH7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.39■□□□□ 0.53
Cul4aQ3TCH7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.39■□□□□ 0.53
Cul4aQ3TCH7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms