Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox4Q06831 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.24■□□□□ 0.35
Sox4Q06831 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.23■□□□□ 0.35
Sox4Q06831 Gm37055-201ENSMUST00000191866 133 ntBASIC17.23■□□□□ 0.35
Sox4Q06831 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.23■□□□□ 0.35
Sox4Q06831 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.23■□□□□ 0.35
Sox4Q06831 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.23■□□□□ 0.35
Sox4Q06831 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.23■□□□□ 0.35
Sox4Q06831 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.23■□□□□ 0.35
Sox4Q06831 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.23■□□□□ 0.35
Sox4Q06831 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Sox4Q06831 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.23■□□□□ 0.35
Sox4Q06831 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Sox4Q06831 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox4Q06831 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Gm12085-201ENSMUST00000119263 940 ntBASIC17.22■□□□□ 0.35
Sox4Q06831 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.22■□□□□ 0.35
Sox4Q06831 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.22■□□□□ 0.35
Sox4Q06831 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sox4Q06831 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.22■□□□□ 0.35
Sox4Q06831 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sox4Q06831 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox4Q06831 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox4Q06831 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox4Q06831 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox4Q06831 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox4Q06831 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox4Q06831 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox4Q06831 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.21■□□□□ 0.35
Sox4Q06831 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.21■□□□□ 0.35
Sox4Q06831 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox4Q06831 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox4Q06831 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox4Q06831 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sox4Q06831 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sox4Q06831 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.2■□□□□ 0.34
Sox4Q06831 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox4Q06831 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Sox4Q06831 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sox4Q06831 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox4Q06831 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox4Q06831 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sox4Q06831 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox4Q06831 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox4Q06831 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.2■□□□□ 0.34
Sox4Q06831 Timm23-208ENSMUST00000226683 750 ntBASIC17.2■□□□□ 0.34
Sox4Q06831 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sox4Q06831 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox4Q06831 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox4Q06831 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.19■□□□□ 0.34
Sox4Q06831 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.19■□□□□ 0.34
Sox4Q06831 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.19■□□□□ 0.34
Sox4Q06831 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Gm5417-201ENSMUST00000079706 384 ntBASIC17.19■□□□□ 0.34
Sox4Q06831 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sox4Q06831 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Sox4Q06831 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sox4Q06831 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sox4Q06831 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox4Q06831 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sox4Q06831 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox4Q06831 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms