Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.97□□□□□ -0.33
Hspg2Q05793 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hspg2Q05793 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.97□□□□□ -0.33
Hspg2Q05793 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hspg2Q05793 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hspg2Q05793 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.96□□□□□ -0.33
Hspg2Q05793 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.96□□□□□ -0.33
Hspg2Q05793 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hspg2Q05793 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hspg2Q05793 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hspg2Q05793 Gm5864-201ENSMUST00000202263 970 ntBASIC12.96□□□□□ -0.33
Hspg2Q05793 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.96□□□□□ -0.33
Hspg2Q05793 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hspg2Q05793 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hspg2Q05793 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hspg2Q05793 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hspg2Q05793 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.96□□□□□ -0.34
Hspg2Q05793 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.96□□□□□ -0.34
Hspg2Q05793 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.96□□□□□ -0.34
Hspg2Q05793 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Hspg2Q05793 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hspg2Q05793 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.96□□□□□ -0.34
Hspg2Q05793 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hspg2Q05793 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Hspg2Q05793 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Gm18733-201ENSMUST00000173950 856 ntBASIC12.95□□□□□ -0.34
Hspg2Q05793 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hspg2Q05793 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hspg2Q05793 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Hspg2Q05793 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hspg2Q05793 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.94□□□□□ -0.34
Hspg2Q05793 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.94□□□□□ -0.34
Hspg2Q05793 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.94□□□□□ -0.34
Hspg2Q05793 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Hspg2Q05793 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hspg2Q05793 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hspg2Q05793 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.94□□□□□ -0.34
Hspg2Q05793 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hspg2Q05793 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hspg2Q05793 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Hspg2Q05793 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Hspg2Q05793 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hspg2Q05793 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Gm11594-201ENSMUST00000122313 162 ntBASIC12.93□□□□□ -0.34
Hspg2Q05793 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.93□□□□□ -0.34
Hspg2Q05793 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hspg2Q05793 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hspg2Q05793 Gm2651-201ENSMUST00000203560 838 ntBASIC12.92□□□□□ -0.34
Hspg2Q05793 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hspg2Q05793 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hspg2Q05793 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Hspg2Q05793 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.92□□□□□ -0.34
Hspg2Q05793 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms