Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Vps45P97390 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.11■□□□□ 0.49
Vps45P97390 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps45P97390 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Gm15375-201ENSMUST00000119510 849 ntBASIC18.1■□□□□ 0.49
Vps45P97390 Gm21362-201ENSMUST00000194272 928 ntBASIC18.1■□□□□ 0.49
Vps45P97390 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Vps45P97390 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.1■□□□□ 0.49
Vps45P97390 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Vps45P97390 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.1■□□□□ 0.49
Vps45P97390 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vps45P97390 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps45P97390 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vps45P97390 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vps45P97390 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps45P97390 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.09■□□□□ 0.49
Vps45P97390 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps45P97390 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps45P97390 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.08■□□□□ 0.49
Vps45P97390 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.08■□□□□ 0.49
Vps45P97390 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.08■□□□□ 0.49
Vps45P97390 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps45P97390 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Vps45P97390 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps45P97390 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Vps45P97390 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.08■□□□□ 0.49
Vps45P97390 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps45P97390 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.08■□□□□ 0.48
Vps45P97390 Mir6349-201ENSMUST00000184059 97 ntBASIC18.08■□□□□ 0.48
Vps45P97390 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vps45P97390 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps45P97390 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps45P97390 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps45P97390 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Vps45P97390 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps45P97390 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.08■□□□□ 0.48
Vps45P97390 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps45P97390 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps45P97390 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps45P97390 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Vps45P97390 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.08■□□□□ 0.48
Vps45P97390 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.08■□□□□ 0.48
Vps45P97390 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Vps45P97390 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Gm29791-202ENSMUST00000207888 369 ntBASIC18.07■□□□□ 0.48
Vps45P97390 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.07■□□□□ 0.48
Vps45P97390 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps45P97390 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Vps45P97390 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.06■□□□□ 0.48
Vps45P97390 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.06■□□□□ 0.48
Vps45P97390 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.06■□□□□ 0.48
Vps45P97390 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps45P97390 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms