Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SgcbP82349 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SgcbP82349 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SgcbP82349 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SgcbP82349 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SgcbP82349 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.64■□□□□ 0.09
SgcbP82349 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.64■□□□□ 0.09
SgcbP82349 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SgcbP82349 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.64■□□□□ 0.09
SgcbP82349 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SgcbP82349 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SgcbP82349 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SgcbP82349 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.63■□□□□ 0.09
SgcbP82349 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SgcbP82349 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SgcbP82349 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.63■□□□□ 0.09
SgcbP82349 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.63■□□□□ 0.09
SgcbP82349 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SgcbP82349 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SgcbP82349 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SgcbP82349 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
SgcbP82349 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.62■□□□□ 0.09
SgcbP82349 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.62■□□□□ 0.09
SgcbP82349 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SgcbP82349 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SgcbP82349 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.62■□□□□ 0.09
SgcbP82349 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SgcbP82349 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.61■□□□□ 0.09
SgcbP82349 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SgcbP82349 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SgcbP82349 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.6■□□□□ 0.09
SgcbP82349 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SgcbP82349 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms