Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rrp1P56183 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.79■□□□□ 0.76
Rrp1P56183 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.79■□□□□ 0.76
Rrp1P56183 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rrp1P56183 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rrp1P56183 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.78■□□□□ 0.76
Rrp1P56183 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.78■□□□□ 0.76
Rrp1P56183 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.78■□□□□ 0.76
Rrp1P56183 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rrp1P56183 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrp1P56183 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrp1P56183 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.78■□□□□ 0.76
Rrp1P56183 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrp1P56183 Gm6365-201ENSMUST00000054711 744 ntBASIC19.78■□□□□ 0.76
Rrp1P56183 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrp1P56183 Zfp783-201ENSMUST00000095946 670 ntBASIC19.78■□□□□ 0.76
Rrp1P56183 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrp1P56183 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrp1P56183 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rrp1P56183 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rrp1P56183 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp1P56183 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rrp1P56183 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rrp1P56183 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp1P56183 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rrp1P56183 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.77■□□□□ 0.76
Rrp1P56183 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.77■□□□□ 0.76
Rrp1P56183 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp1P56183 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp1P56183 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp1P56183 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp1P56183 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.77■□□□□ 0.76
Rrp1P56183 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp1P56183 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rrp1P56183 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rrp1P56183 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rrp1P56183 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Gm10849-201ENSMUST00000100397 618 ntBASIC19.76■□□□□ 0.75
Rrp1P56183 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Rrp1P56183 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp1P56183 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rrp1P56183 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rrp1P56183 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rrp1P56183 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rrp1P56183 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rrp1P56183 Gm6211-202ENSMUST00000167849 925 ntBASIC19.75■□□□□ 0.75
Rrp1P56183 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp1P56183 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rrp1P56183 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp1P56183 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rrp1P56183 Mir2861-201ENSMUST00000175539 82 ntBASIC19.74■□□□□ 0.75
Rrp1P56183 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.74■□□□□ 0.75
Rrp1P56183 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rrp1P56183 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp1P56183 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp1P56183 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp1P56183 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp1P56183 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp1P56183 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp1P56183 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Rrp1P56183 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp1P56183 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rrp1P56183 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp1P56183 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rrp1P56183 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp1P56183 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.73■□□□□ 0.75
Rrp1P56183 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms