Protein–RNA interactions for Protein: P51827

Aff3, AF4/FMR2 family member 3, mousemouse

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff3P51827 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aff3P51827 Mir1668-201ENSMUST00000184114 107 ntBASIC18.4■□□□□ 0.54
Aff3P51827 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aff3P51827 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aff3P51827 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aff3P51827 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Aff3P51827 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Aff3P51827 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aff3P51827 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.4■□□□□ 0.54
Aff3P51827 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aff3P51827 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Aff3P51827 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aff3P51827 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aff3P51827 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Aff3P51827 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Aff3P51827 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Aff3P51827 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Aff3P51827 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Aff3P51827 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Aff3P51827 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Aff3P51827 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Aff3P51827 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.39■□□□□ 0.53
Aff3P51827 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Aff3P51827 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Aff3P51827 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Aff3P51827 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Aff3P51827 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Aff3P51827 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.39■□□□□ 0.53
Aff3P51827 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Aff3P51827 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Aff3P51827 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Aff3P51827 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.39■□□□□ 0.53
Aff3P51827 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Aff3P51827 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Aff3P51827 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Aff3P51827 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Aff3P51827 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Aff3P51827 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.38■□□□□ 0.53
Aff3P51827 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.38■□□□□ 0.53
Aff3P51827 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Aff3P51827 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Aff3P51827 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Aff3P51827 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Aff3P51827 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Aff3P51827 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Aff3P51827 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aff3P51827 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.37■□□□□ 0.53
Aff3P51827 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aff3P51827 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Aff3P51827 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.37■□□□□ 0.53
Aff3P51827 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Aff3P51827 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Aff3P51827 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aff3P51827 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Aff3P51827 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aff3P51827 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Aff3P51827 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aff3P51827 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aff3P51827 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aff3P51827 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Aff3P51827 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Aff3P51827 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Aff3P51827 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Aff3P51827 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.36■□□□□ 0.53
Aff3P51827 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.36■□□□□ 0.53
Aff3P51827 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Gm7213-201ENSMUST00000215977 950 ntBASIC18.36■□□□□ 0.53
Aff3P51827 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Aff3P51827 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aff3P51827 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aff3P51827 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.35■□□□□ 0.53
Aff3P51827 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aff3P51827 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aff3P51827 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.35■□□□□ 0.53
Aff3P51827 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.35■□□□□ 0.53
Aff3P51827 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Aff3P51827 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aff3P51827 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Aff3P51827 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aff3P51827 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aff3P51827 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aff3P51827 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Aff3P51827 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Aff3P51827 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Aff3P51827 Mir3081-201ENSMUST00000175305 84 ntBASIC18.34■□□□□ 0.53
Aff3P51827 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Aff3P51827 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Aff3P51827 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms