Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm24589-201ENSMUST00000116692 94 ntBASIC20.58■□□□□ 0.89
LtbrP50284 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LtbrP50284 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LtbrP50284 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.58■□□□□ 0.89
LtbrP50284 Gm27389-201ENSMUST00000183622 195 ntBASIC20.58■□□□□ 0.89
LtbrP50284 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LtbrP50284 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LtbrP50284 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.57■□□□□ 0.88
LtbrP50284 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.57■□□□□ 0.88
LtbrP50284 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.57■□□□□ 0.88
LtbrP50284 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.57■□□□□ 0.88
LtbrP50284 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LtbrP50284 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LtbrP50284 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.56■□□□□ 0.88
LtbrP50284 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.56■□□□□ 0.88
LtbrP50284 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
LtbrP50284 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Mir2861-201ENSMUST00000175539 82 ntBASIC20.56■□□□□ 0.88
LtbrP50284 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LtbrP50284 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LtbrP50284 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.56■□□□□ 0.88
LtbrP50284 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LtbrP50284 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.55■□□□□ 0.88
LtbrP50284 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.55■□□□□ 0.88
LtbrP50284 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.55■□□□□ 0.88
LtbrP50284 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Gm13474-201ENSMUST00000122466 815 ntBASIC20.55■□□□□ 0.88
LtbrP50284 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LtbrP50284 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LtbrP50284 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.55■□□□□ 0.88
LtbrP50284 Gm18115-201ENSMUST00000221209 621 ntBASIC20.55■□□□□ 0.88
LtbrP50284 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LtbrP50284 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LtbrP50284 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LtbrP50284 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.54■□□□□ 0.88
LtbrP50284 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LtbrP50284 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LtbrP50284 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LtbrP50284 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LtbrP50284 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LtbrP50284 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LtbrP50284 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.54■□□□□ 0.88
LtbrP50284 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LtbrP50284 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LtbrP50284 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.53■□□□□ 0.88
LtbrP50284 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.53■□□□□ 0.88
LtbrP50284 Fst-202ENSMUST00000223640 2612 ntBASIC20.53■□□□□ 0.88
LtbrP50284 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Mir3081-201ENSMUST00000175305 84 ntBASIC20.53■□□□□ 0.88
LtbrP50284 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LtbrP50284 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LtbrP50284 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
LtbrP50284 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.53■□□□□ 0.88
LtbrP50284 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LtbrP50284 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LtbrP50284 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LtbrP50284 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms