Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.75■□□□□ 0.75
Brca1P48754 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brca1P48754 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brca1P48754 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brca1P48754 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Brca1P48754 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Brca1P48754 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Brca1P48754 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.75■□□□□ 0.75
Brca1P48754 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brca1P48754 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brca1P48754 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.75■□□□□ 0.75
Brca1P48754 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Brca1P48754 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brca1P48754 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Brca1P48754 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brca1P48754 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brca1P48754 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brca1P48754 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brca1P48754 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.74■□□□□ 0.75
Brca1P48754 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brca1P48754 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.74■□□□□ 0.75
Brca1P48754 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brca1P48754 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Brca1P48754 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brca1P48754 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Brca1P48754 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Brca1P48754 Gm26039-201ENSMUST00000158152 144 ntBASIC19.74■□□□□ 0.75
Brca1P48754 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.74■□□□□ 0.75
Brca1P48754 Gm5864-201ENSMUST00000202263 970 ntBASIC19.74■□□□□ 0.75
Brca1P48754 Gm45328-201ENSMUST00000210942 917 ntBASIC19.74■□□□□ 0.75
Brca1P48754 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.74■□□□□ 0.75
Brca1P48754 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.74■□□□□ 0.75
Brca1P48754 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Brca1P48754 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brca1P48754 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brca1P48754 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Brca1P48754 Gm27525-201ENSMUST00000184465 107 ntBASIC19.73■□□□□ 0.75
Brca1P48754 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brca1P48754 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brca1P48754 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brca1P48754 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Brca1P48754 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Brca1P48754 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Brca1P48754 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brca1P48754 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brca1P48754 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Brca1P48754 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.72■□□□□ 0.75
Brca1P48754 Gm6623-201ENSMUST00000173570 544 ntBASIC19.72■□□□□ 0.75
Brca1P48754 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.72■□□□□ 0.75
Brca1P48754 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Brca1P48754 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.72■□□□□ 0.75
Brca1P48754 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Brca1P48754 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brca1P48754 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.71■□□□□ 0.75
Brca1P48754 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.71■□□□□ 0.75
Brca1P48754 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brca1P48754 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Brca1P48754 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Brca1P48754 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Brca1P48754 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.71■□□□□ 0.75
Brca1P48754 Gm43347-201ENSMUST00000200226 580 ntBASIC19.71■□□□□ 0.75
Brca1P48754 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.71■□□□□ 0.75
Brca1P48754 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.71■□□□□ 0.75
Brca1P48754 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brca1P48754 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brca1P48754 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brca1P48754 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brca1P48754 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Brca1P48754 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brca1P48754 Gm15794-201ENSMUST00000120182 631 ntBASIC19.7■□□□□ 0.74
Brca1P48754 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brca1P48754 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Brca1P48754 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.7■□□□□ 0.74
Brca1P48754 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Brca1P48754 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brca1P48754 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Brca1P48754 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Brca1P48754 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Brca1P48754 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brca1P48754 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Brca1P48754 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brca1P48754 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.69■□□□□ 0.74
Brca1P48754 Gm37935-201ENSMUST00000192012 982 ntBASIC19.69■□□□□ 0.74
Brca1P48754 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brca1P48754 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brca1P48754 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brca1P48754 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brca1P48754 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Brca1P48754 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Brca1P48754 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms