Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.56■□□□□ 0.24
Nkx2-6P43688 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.56■□□□□ 0.24
Nkx2-6P43688 Gm12085-201ENSMUST00000119263 940 ntBASIC16.56■□□□□ 0.24
Nkx2-6P43688 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.56■□□□□ 0.24
Nkx2-6P43688 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx2-6P43688 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Gm10013-201ENSMUST00000106074 672 ntBASIC16.55■□□□□ 0.24
Nkx2-6P43688 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.55■□□□□ 0.24
Nkx2-6P43688 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Gm2274-201ENSMUST00000184539 609 ntBASIC16.55■□□□□ 0.24
Nkx2-6P43688 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Tgds-204ENSMUST00000228543 1594 ntBASIC16.55■□□□□ 0.24
Nkx2-6P43688 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx2-6P43688 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx2-6P43688 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.53■□□□□ 0.24
Nkx2-6P43688 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx2-6P43688 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx2-6P43688 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nkx2-6P43688 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Nkx2-6P43688 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nkx2-6P43688 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nkx2-6P43688 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.52■□□□□ 0.23
Nkx2-6P43688 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms