Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Gm10849-201ENSMUST00000100397 618 ntBASIC16.95■□□□□ 0.3
Tnfsf4P43488 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Gm29791-202ENSMUST00000207888 369 ntBASIC16.95■□□□□ 0.3
Tnfsf4P43488 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfsf4P43488 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf4P43488 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf4P43488 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf4P43488 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf4P43488 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.94■□□□□ 0.3
Tnfsf4P43488 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
Tnfsf4P43488 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf4P43488 Gm26571-201ENSMUST00000181399 666 ntBASIC16.94■□□□□ 0.3
Tnfsf4P43488 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.94■□□□□ 0.3
Tnfsf4P43488 Zfp783-201ENSMUST00000095946 670 ntBASIC16.94■□□□□ 0.3
Tnfsf4P43488 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf4P43488 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfsf4P43488 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.93■□□□□ 0.3
Tnfsf4P43488 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Gm44549-201ENSMUST00000208351 577 ntBASIC16.93■□□□□ 0.3
Tnfsf4P43488 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.93■□□□□ 0.3
Tnfsf4P43488 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfsf4P43488 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfsf4P43488 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfsf4P43488 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfsf4P43488 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.92■□□□□ 0.3
Tnfsf4P43488 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.92■□□□□ 0.3
Tnfsf4P43488 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfsf4P43488 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfsf4P43488 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfsf4P43488 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfsf4P43488 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfsf4P43488 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Gm18284-201ENSMUST00000172604 624 ntBASIC16.91■□□□□ 0.3
Tnfsf4P43488 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.91■□□□□ 0.3
Tnfsf4P43488 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfsf4P43488 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Mir8112-201ENSMUST00000184382 131 ntBASIC16.9■□□□□ 0.3
Tnfsf4P43488 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tnfsf4P43488 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms