Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.84■□□□□ 0.61
HttP42859 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HttP42859 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HttP42859 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.83■□□□□ 0.61
HttP42859 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
HttP42859 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
HttP42859 Gm43438-201ENSMUST00000198133 379 ntBASIC18.83■□□□□ 0.61
HttP42859 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HttP42859 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HttP42859 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HttP42859 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HttP42859 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
HttP42859 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HttP42859 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HttP42859 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HttP42859 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HttP42859 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HttP42859 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HttP42859 Gm7862-201ENSMUST00000121461 292 ntBASIC18.82■□□□□ 0.6
HttP42859 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HttP42859 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HttP42859 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 Gm14822-201ENSMUST00000122247 291 ntBASIC18.82■□□□□ 0.6
HttP42859 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HttP42859 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HttP42859 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HttP42859 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.82■□□□□ 0.6
HttP42859 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HttP42859 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.81■□□□□ 0.6
HttP42859 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.81■□□□□ 0.6
HttP42859 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HttP42859 Golph3-202ENSMUST00000226517 2359 ntBASIC18.81■□□□□ 0.6
HttP42859 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HttP42859 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.8■□□□□ 0.6
HttP42859 Gm25911-201ENSMUST00000157621 56 ntBASIC18.8■□□□□ 0.6
HttP42859 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HttP42859 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Gm14057-201ENSMUST00000120631 482 ntBASIC18.8■□□□□ 0.6
HttP42859 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.8■□□□□ 0.6
HttP42859 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.8■□□□□ 0.6
HttP42859 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HttP42859 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HttP42859 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HttP42859 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HttP42859 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HttP42859 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.79■□□□□ 0.6
HttP42859 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HttP42859 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HttP42859 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.79■□□□□ 0.6
HttP42859 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HttP42859 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.79■□□□□ 0.6
HttP42859 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Gm15467-201ENSMUST00000120582 445 ntBASIC18.79■□□□□ 0.6
HttP42859 Gm10576-201ENSMUST00000191927 825 ntBASIC18.79■□□□□ 0.6
HttP42859 Psmb5-202ENSMUST00000227257 622 ntBASIC18.79■□□□□ 0.6
HttP42859 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HttP42859 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms