Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd9P40240 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cd9P40240 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.28■□□□□ 0.36
Cd9P40240 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cd9P40240 Gm10517-202ENSMUST00000192970 758 ntBASIC17.28■□□□□ 0.36
Cd9P40240 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cd9P40240 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd9P40240 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd9P40240 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd9P40240 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Cd9P40240 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd9P40240 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd9P40240 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.27■□□□□ 0.36
Cd9P40240 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.27■□□□□ 0.36
Cd9P40240 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 Gm10653-202ENSMUST00000139570 835 ntBASIC17.27■□□□□ 0.36
Cd9P40240 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cd9P40240 Gm24841-201ENSMUST00000158676 357 ntBASIC17.27■□□□□ 0.36
Cd9P40240 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 Gm29257-201ENSMUST00000186115 639 ntBASIC17.27■□□□□ 0.36
Cd9P40240 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.27■□□□□ 0.36
Cd9P40240 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd9P40240 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd9P40240 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd9P40240 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd9P40240 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd9P40240 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd9P40240 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd9P40240 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd9P40240 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cd9P40240 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd9P40240 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd9P40240 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd9P40240 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.26■□□□□ 0.35
Cd9P40240 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd9P40240 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd9P40240 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cd9P40240 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cd9P40240 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd9P40240 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cd9P40240 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd9P40240 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd9P40240 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd9P40240 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.24■□□□□ 0.35
Cd9P40240 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Cd9P40240 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd9P40240 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Cd9P40240 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd9P40240 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.24■□□□□ 0.35
Cd9P40240 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd9P40240 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cd9P40240 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cd9P40240 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cd9P40240 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.23■□□□□ 0.35
Cd9P40240 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cd9P40240 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd9P40240 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd9P40240 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd9P40240 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.22■□□□□ 0.35
Cd9P40240 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd9P40240 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd9P40240 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms