Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.96■□□□□ 0.47
Mmp13P33435 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.96■□□□□ 0.47
Mmp13P33435 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Mmp13P33435 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.96■□□□□ 0.47
Mmp13P33435 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp13P33435 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Mmp13P33435 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Mmp13P33435 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Mmp13P33435 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.95■□□□□ 0.46
Mmp13P33435 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.95■□□□□ 0.46
Mmp13P33435 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.95■□□□□ 0.46
Mmp13P33435 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Mmp13P33435 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Mmp13P33435 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Mmp13P33435 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.95■□□□□ 0.46
Mmp13P33435 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp13P33435 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.95■□□□□ 0.46
Mmp13P33435 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.94■□□□□ 0.46
Mmp13P33435 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mmp13P33435 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Mmp13P33435 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.94■□□□□ 0.46
Mmp13P33435 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.94■□□□□ 0.46
Mmp13P33435 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp13P33435 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Mmp13P33435 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.93■□□□□ 0.46
Mmp13P33435 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.93■□□□□ 0.46
Mmp13P33435 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.93■□□□□ 0.46
Mmp13P33435 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.93■□□□□ 0.46
Mmp13P33435 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Mmp13P33435 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.93■□□□□ 0.46
Mmp13P33435 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Mmp13P33435 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.93■□□□□ 0.46
Mmp13P33435 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Mmp13P33435 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Mmp13P33435 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.93■□□□□ 0.46
Mmp13P33435 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp13P33435 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Mmp13P33435 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.92■□□□□ 0.46
Mmp13P33435 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.92■□□□□ 0.46
Mmp13P33435 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp13P33435 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Mmp13P33435 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.92■□□□□ 0.46
Mmp13P33435 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp13P33435 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp13P33435 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp13P33435 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp13P33435 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.91■□□□□ 0.46
Mmp13P33435 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.91■□□□□ 0.46
Mmp13P33435 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms