Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a11P31650 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a11P31650 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a11P31650 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc6a11P31650 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a11P31650 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a11P31650 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a11P31650 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc6a11P31650 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc6a11P31650 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a11P31650 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a11P31650 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a11P31650 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a11P31650 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a11P31650 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a11P31650 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a11P31650 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a11P31650 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a11P31650 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Slc6a11P31650 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.64■□□□□ 0.25
Slc6a11P31650 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Slc6a11P31650 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a11P31650 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a11P31650 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a11P31650 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Slc6a11P31650 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.63■□□□□ 0.25
Slc6a11P31650 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Slc6a11P31650 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Slc6a11P31650 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Slc6a11P31650 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a11P31650 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Slc6a11P31650 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Slc6a11P31650 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Slc6a11P31650 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Slc6a11P31650 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Slc6a11P31650 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slc6a11P31650 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Slc6a11P31650 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.62■□□□□ 0.25
Slc6a11P31650 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.62■□□□□ 0.25
Slc6a11P31650 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a11P31650 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Slc6a11P31650 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.61■□□□□ 0.25
Slc6a11P31650 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.61■□□□□ 0.25
Slc6a11P31650 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Slc6a11P31650 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.61■□□□□ 0.25
Slc6a11P31650 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.61■□□□□ 0.25
Slc6a11P31650 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Slc6a11P31650 Gm26524-201ENSMUST00000192339 390 ntBASIC16.61■□□□□ 0.25
Slc6a11P31650 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Rab3c-203ENSMUST00000224180 967 ntBASIC16.61■□□□□ 0.25
Slc6a11P31650 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Slc6a11P31650 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.61■□□□□ 0.25
Slc6a11P31650 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a11P31650 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a11P31650 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a11P31650 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
Slc6a11P31650 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms