Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.57■□□□□ 0.4
PdgfbP31240 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.57■□□□□ 0.4
PdgfbP31240 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.57■□□□□ 0.4
PdgfbP31240 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PdgfbP31240 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PdgfbP31240 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfbP31240 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfbP31240 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PdgfbP31240 Gm11452-201ENSMUST00000122376 690 ntBASIC17.56■□□□□ 0.4
PdgfbP31240 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PdgfbP31240 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
PdgfbP31240 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
PdgfbP31240 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.56■□□□□ 0.4
PdgfbP31240 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfbP31240 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfbP31240 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdgfbP31240 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfbP31240 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfbP31240 Tgds-204ENSMUST00000228543 1594 ntBASIC17.55■□□□□ 0.4
PdgfbP31240 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.55■□□□□ 0.4
PdgfbP31240 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfbP31240 Gm27525-201ENSMUST00000184465 107 ntBASIC17.55■□□□□ 0.4
PdgfbP31240 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfbP31240 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfbP31240 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdgfbP31240 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PdgfbP31240 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Gm12895-201ENSMUST00000122214 226 ntBASIC17.54■□□□□ 0.4
PdgfbP31240 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.54■□□□□ 0.4
PdgfbP31240 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PdgfbP31240 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PdgfbP31240 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdgfbP31240 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfbP31240 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfbP31240 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfbP31240 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.53■□□□□ 0.4
PdgfbP31240 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.53■□□□□ 0.4
PdgfbP31240 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.53■□□□□ 0.4
PdgfbP31240 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfbP31240 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.53■□□□□ 0.4
PdgfbP31240 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PdgfbP31240 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PdgfbP31240 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.52■□□□□ 0.4
PdgfbP31240 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfbP31240 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfbP31240 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.52■□□□□ 0.4
PdgfbP31240 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfbP31240 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PdgfbP31240 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.52■□□□□ 0.4
PdgfbP31240 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfbP31240 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfbP31240 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdgfbP31240 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PdgfbP31240 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.52■□□□□ 0.39
PdgfbP31240 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PdgfbP31240 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PdgfbP31240 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PdgfbP31240 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PdgfbP31240 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PdgfbP31240 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PdgfbP31240 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PdgfbP31240 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfbP31240 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.51■□□□□ 0.39
PdgfbP31240 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PdgfbP31240 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfbP31240 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfbP31240 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.51■□□□□ 0.39
PdgfbP31240 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfbP31240 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfbP31240 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.51■□□□□ 0.39
PdgfbP31240 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdgfbP31240 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.51■□□□□ 0.39
PdgfbP31240 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.51■□□□□ 0.39
PdgfbP31240 Gm18733-201ENSMUST00000173950 856 ntBASIC17.51■□□□□ 0.39
PdgfbP31240 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.51■□□□□ 0.39
PdgfbP31240 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PdgfbP31240 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms