Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.08■□□□□ 0.64
Pde6bP23440 Gm38027-201ENSMUST00000192315 235 ntBASIC19.08■□□□□ 0.64
Pde6bP23440 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.08■□□□□ 0.64
Pde6bP23440 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.08■□□□□ 0.64
Pde6bP23440 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Pde6bP23440 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.08■□□□□ 0.64
Pde6bP23440 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pde6bP23440 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pde6bP23440 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.08■□□□□ 0.64
Pde6bP23440 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pde6bP23440 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.07■□□□□ 0.64
Pde6bP23440 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pde6bP23440 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Pde6bP23440 Gm21362-201ENSMUST00000194272 928 ntBASIC19.07■□□□□ 0.64
Pde6bP23440 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pde6bP23440 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Pde6bP23440 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pde6bP23440 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pde6bP23440 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pde6bP23440 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.06■□□□□ 0.64
Pde6bP23440 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pde6bP23440 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6bP23440 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.06■□□□□ 0.64
Pde6bP23440 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.06■□□□□ 0.64
Pde6bP23440 Gm45058-201ENSMUST00000205810 766 ntBASIC19.06■□□□□ 0.64
Pde6bP23440 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6bP23440 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.06■□□□□ 0.64
Pde6bP23440 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6bP23440 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6bP23440 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6bP23440 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.06■□□□□ 0.64
Pde6bP23440 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6bP23440 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6bP23440 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pde6bP23440 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pde6bP23440 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.05■□□□□ 0.64
Pde6bP23440 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pde6bP23440 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Pde6bP23440 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Pde6bP23440 Gm2274-201ENSMUST00000184539 609 ntBASIC19.05■□□□□ 0.64
Pde6bP23440 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.05■□□□□ 0.64
Pde6bP23440 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pde6bP23440 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.05■□□□□ 0.64
Pde6bP23440 Gm4974-201ENSMUST00000209974 875 ntBASIC19.05■□□□□ 0.64
Pde6bP23440 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.05■□□□□ 0.64
Pde6bP23440 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.05■□□□□ 0.64
Pde6bP23440 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pde6bP23440 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pde6bP23440 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.05■□□□□ 0.64
Pde6bP23440 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pde6bP23440 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pde6bP23440 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pde6bP23440 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Pde6bP23440 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6bP23440 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Pde6bP23440 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6bP23440 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6bP23440 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.04■□□□□ 0.64
Pde6bP23440 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Pde6bP23440 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pde6bP23440 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6bP23440 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6bP23440 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6bP23440 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6bP23440 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pde6bP23440 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Gm10013-201ENSMUST00000106074 672 ntBASIC19.03■□□□□ 0.64
Pde6bP23440 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.03■□□□□ 0.64
Pde6bP23440 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pde6bP23440 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.03■□□□□ 0.64
Pde6bP23440 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pde6bP23440 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pde6bP23440 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pde6bP23440 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pde6bP23440 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms