Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h2P0C090 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h2P0C090 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h2P0C090 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h2P0C090 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h2P0C090 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h2P0C090 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.83■□□□□ 0.45
Rc3h2P0C090 Fst-202ENSMUST00000223640 2612 ntBASIC17.83■□□□□ 0.44
Rc3h2P0C090 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rc3h2P0C090 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rc3h2P0C090 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.83■□□□□ 0.44
Rc3h2P0C090 Mir5130-201ENSMUST00000175160 84 ntBASIC17.83■□□□□ 0.44
Rc3h2P0C090 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rc3h2P0C090 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rc3h2P0C090 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rc3h2P0C090 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rc3h2P0C090 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rc3h2P0C090 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.82■□□□□ 0.44
Rc3h2P0C090 Gm18032-201ENSMUST00000222541 538 ntBASIC17.82■□□□□ 0.44
Rc3h2P0C090 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h2P0C090 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.81■□□□□ 0.44
Rc3h2P0C090 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rc3h2P0C090 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.8■□□□□ 0.44
Rc3h2P0C090 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h2P0C090 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Gm7791-201ENSMUST00000219066 539 ntBASIC17.79■□□□□ 0.44
Rc3h2P0C090 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.79■□□□□ 0.44
Rc3h2P0C090 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h2P0C090 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h2P0C090 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h2P0C090 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rc3h2P0C090 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rc3h2P0C090 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h2P0C090 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Rc3h2P0C090 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.78■□□□□ 0.44
Rc3h2P0C090 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.78■□□□□ 0.44
Rc3h2P0C090 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms