Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.18■□□□□ 0.18
P06336 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.18■□□□□ 0.18
P06336 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
P06336 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
P06336 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
P06336 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
P06336 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P06336 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
P06336 Rarb-207ENSMUST00000225921 2756 ntBASIC16.17■□□□□ 0.18
P06336 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.17■□□□□ 0.18
P06336 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.17■□□□□ 0.18
P06336 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.17■□□□□ 0.18
P06336 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P06336 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.17■□□□□ 0.18
P06336 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P06336 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Mir1199-201ENSMUST00000117015 119 ntBASIC16.16■□□□□ 0.18
P06336 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.16■□□□□ 0.18
P06336 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P06336 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.15■□□□□ 0.18
P06336 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.15■□□□□ 0.18
P06336 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.15■□□□□ 0.18
P06336 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.15■□□□□ 0.18
P06336 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P06336 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
P06336 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
P06336 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
P06336 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.14■□□□□ 0.17
P06336 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.14■□□□□ 0.17
P06336 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
P06336 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.14■□□□□ 0.17
P06336 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.14■□□□□ 0.17
P06336 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.14■□□□□ 0.17
P06336 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
P06336 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
P06336 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.14■□□□□ 0.17
P06336 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.14■□□□□ 0.17
P06336 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P06336 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P06336 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
P06336 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms