Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.19■□□□□ 0.5
PrnpP04925 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.19■□□□□ 0.5
PrnpP04925 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PrnpP04925 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PrnpP04925 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PrnpP04925 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PrnpP04925 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PrnpP04925 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.18■□□□□ 0.5
PrnpP04925 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.18■□□□□ 0.5
PrnpP04925 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PrnpP04925 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PrnpP04925 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PrnpP04925 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PrnpP04925 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.17■□□□□ 0.5
PrnpP04925 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PrnpP04925 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.17■□□□□ 0.5
PrnpP04925 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.17■□□□□ 0.5
PrnpP04925 Gm26039-201ENSMUST00000158152 144 ntBASIC18.17■□□□□ 0.5
PrnpP04925 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PrnpP04925 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PrnpP04925 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PrnpP04925 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.17■□□□□ 0.5
PrnpP04925 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PrnpP04925 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.17■□□□□ 0.5
PrnpP04925 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PrnpP04925 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PrnpP04925 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PrnpP04925 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PrnpP04925 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.16■□□□□ 0.5
PrnpP04925 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PrnpP04925 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PrnpP04925 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.16■□□□□ 0.5
PrnpP04925 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.16■□□□□ 0.5
PrnpP04925 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.16■□□□□ 0.5
PrnpP04925 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PrnpP04925 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PrnpP04925 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PrnpP04925 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PrnpP04925 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
PrnpP04925 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.15■□□□□ 0.5
PrnpP04925 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 Gm17807-201ENSMUST00000186869 298 ntBASIC18.15■□□□□ 0.5
PrnpP04925 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PrnpP04925 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PrnpP04925 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrnpP04925 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PrnpP04925 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrnpP04925 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrnpP04925 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.14■□□□□ 0.49
PrnpP04925 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrnpP04925 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrnpP04925 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrnpP04925 Gm17971-201ENSMUST00000190239 806 ntBASIC18.14■□□□□ 0.49
PrnpP04925 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.14■□□□□ 0.49
PrnpP04925 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrnpP04925 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PrnpP04925 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.14■□□□□ 0.49
PrnpP04925 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.14■□□□□ 0.49
PrnpP04925 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PrnpP04925 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PrnpP04925 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms