Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CfdP03953 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CfdP03953 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CfdP03953 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CfdP03953 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CfdP03953 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CfdP03953 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CfdP03953 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CfdP03953 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CfdP03953 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CfdP03953 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Gm21956-201ENSMUST00000179946 522 ntBASIC14.66□□□□□ -0.06
CfdP03953 Gm26833-201ENSMUST00000180899 440 ntBASIC14.66□□□□□ -0.06
CfdP03953 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.66□□□□□ -0.06
CfdP03953 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.66□□□□□ -0.06
CfdP03953 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.66□□□□□ -0.06
CfdP03953 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CfdP03953 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
CfdP03953 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CfdP03953 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CfdP03953 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.65□□□□□ -0.06
CfdP03953 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.65□□□□□ -0.06
CfdP03953 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.65□□□□□ -0.06
CfdP03953 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.65□□□□□ -0.06
CfdP03953 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.65□□□□□ -0.06
CfdP03953 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CfdP03953 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CfdP03953 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CfdP03953 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CfdP03953 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CfdP03953 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.64□□□□□ -0.07
CfdP03953 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.64□□□□□ -0.07
CfdP03953 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CfdP03953 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.64□□□□□ -0.07
CfdP03953 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Mir8112-201ENSMUST00000184382 131 ntBASIC14.64□□□□□ -0.07
CfdP03953 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.64□□□□□ -0.07
CfdP03953 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.64□□□□□ -0.07
CfdP03953 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CfdP03953 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.64□□□□□ -0.07
CfdP03953 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CfdP03953 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CfdP03953 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms