Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.05■□□□□ 0.32
ClppO88696 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.05■□□□□ 0.32
ClppO88696 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.05■□□□□ 0.32
ClppO88696 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClppO88696 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ClppO88696 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.04■□□□□ 0.32
ClppO88696 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ClppO88696 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.04■□□□□ 0.32
ClppO88696 Gm21814-202ENSMUST00000203277 873 ntBASIC17.04■□□□□ 0.32
ClppO88696 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.04■□□□□ 0.32
ClppO88696 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ClppO88696 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.04■□□□□ 0.32
ClppO88696 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ClppO88696 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.03■□□□□ 0.32
ClppO88696 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.03■□□□□ 0.32
ClppO88696 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.03■□□□□ 0.32
ClppO88696 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ClppO88696 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.03■□□□□ 0.32
ClppO88696 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ClppO88696 Gm15565-201ENSMUST00000118890 427 ntBASIC17.03■□□□□ 0.32
ClppO88696 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.03■□□□□ 0.32
ClppO88696 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ClppO88696 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClppO88696 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
ClppO88696 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 BC021767-201ENSMUST00000126387 1716 ntBASIC17.02■□□□□ 0.32
ClppO88696 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.02■□□□□ 0.32
ClppO88696 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.02■□□□□ 0.32
ClppO88696 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Odf3b-204ENSMUST00000227834 930 ntBASIC17.02■□□□□ 0.32
ClppO88696 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClppO88696 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
ClppO88696 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ClppO88696 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ClppO88696 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ClppO88696 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ClppO88696 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
ClppO88696 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ClppO88696 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ClppO88696 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
ClppO88696 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.01■□□□□ 0.31
ClppO88696 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ClppO88696 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.01■□□□□ 0.31
ClppO88696 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ClppO88696 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ClppO88696 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ClppO88696 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClppO88696 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms