Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Dnmt3aO88508 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dnmt3aO88508 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dnmt3aO88508 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dnmt3aO88508 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Dnmt3aO88508 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.58■□□□□ 0.4
Dnmt3aO88508 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dnmt3aO88508 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Dnmt3aO88508 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dnmt3aO88508 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Dnmt3aO88508 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Dnmt3aO88508 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.57■□□□□ 0.4
Dnmt3aO88508 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Dnmt3aO88508 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.56■□□□□ 0.4
Dnmt3aO88508 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.55■□□□□ 0.4
Dnmt3aO88508 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Gm43183-201ENSMUST00000200632 547 ntBASIC17.55■□□□□ 0.4
Dnmt3aO88508 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Dnmt3aO88508 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.54■□□□□ 0.4
Dnmt3aO88508 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.54■□□□□ 0.4
Dnmt3aO88508 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.54■□□□□ 0.4
Dnmt3aO88508 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dnmt3aO88508 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Gm10418-201ENSMUST00000100943 576 ntBASIC17.53■□□□□ 0.4
Dnmt3aO88508 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Gm37292-201ENSMUST00000192062 758 ntBASIC17.53■□□□□ 0.4
Dnmt3aO88508 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.53■□□□□ 0.4
Dnmt3aO88508 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.53■□□□□ 0.4
Dnmt3aO88508 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms