Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Slc4a4O88343 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc4a4O88343 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.7■□□□□ 0.9
Slc4a4O88343 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Slc4a4O88343 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.7■□□□□ 0.9
Slc4a4O88343 Gm11539-201ENSMUST00000119837 557 ntBASIC20.7■□□□□ 0.9
Slc4a4O88343 Gm13436-201ENSMUST00000120418 567 ntBASIC20.7■□□□□ 0.9
Slc4a4O88343 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.7■□□□□ 0.9
Slc4a4O88343 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc4a4O88343 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc4a4O88343 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Slc4a4O88343 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.69■□□□□ 0.9
Slc4a4O88343 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc4a4O88343 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc4a4O88343 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc4a4O88343 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc4a4O88343 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc4a4O88343 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc4a4O88343 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc4a4O88343 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Slc4a4O88343 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc4a4O88343 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Slc4a4O88343 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Slc4a4O88343 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Slc4a4O88343 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc4a4O88343 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.67■□□□□ 0.9
Slc4a4O88343 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Slc4a4O88343 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.67■□□□□ 0.9
Slc4a4O88343 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.67■□□□□ 0.9
Slc4a4O88343 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc4a4O88343 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc4a4O88343 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc4a4O88343 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc4a4O88343 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Gm13559-201ENSMUST00000120476 863 ntBASIC20.66■□□□□ 0.9
Slc4a4O88343 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Mir8112-201ENSMUST00000184382 131 ntBASIC20.66■□□□□ 0.9
Slc4a4O88343 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc4a4O88343 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.66■□□□□ 0.9
Slc4a4O88343 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc4a4O88343 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc4a4O88343 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc4a4O88343 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Slc4a4O88343 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc4a4O88343 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc4a4O88343 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc4a4O88343 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.65■□□□□ 0.9
Slc4a4O88343 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.65■□□□□ 0.9
Slc4a4O88343 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc4a4O88343 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc4a4O88343 Gm9987-201ENSMUST00000069768 567 ntBASIC20.65■□□□□ 0.9
Slc4a4O88343 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc4a4O88343 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
Slc4a4O88343 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slc4a4O88343 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc4a4O88343 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms