Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1i3O35627 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1i3O35627 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1i3O35627 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nr1i3O35627 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1i3O35627 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1i3O35627 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1i3O35627 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1i3O35627 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nr1i3O35627 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nr1i3O35627 Dio3-201ENSMUST00000097228 1449 ntBASIC18.86■□□□□ 0.61
Nr1i3O35627 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1i3O35627 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nr1i3O35627 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nr1i3O35627 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Nr1i3O35627 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1i3O35627 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Gm5408-201ENSMUST00000197998 747 ntBASIC18.85■□□□□ 0.61
Nr1i3O35627 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nr1i3O35627 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Nr1i3O35627 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Nr1i3O35627 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.85■□□□□ 0.61
Nr1i3O35627 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1i3O35627 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.84■□□□□ 0.61
Nr1i3O35627 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Nr1i3O35627 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nr1i3O35627 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1i3O35627 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.84■□□□□ 0.61
Nr1i3O35627 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1i3O35627 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.83■□□□□ 0.61
Nr1i3O35627 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1i3O35627 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1i3O35627 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1i3O35627 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1i3O35627 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Nr1i3O35627 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Nr1i3O35627 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1i3O35627 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1i3O35627 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1i3O35627 Gm15375-201ENSMUST00000119510 849 ntBASIC18.83■□□□□ 0.6
Nr1i3O35627 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.83■□□□□ 0.6
Nr1i3O35627 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.83■□□□□ 0.6
Nr1i3O35627 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1i3O35627 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.83■□□□□ 0.6
Nr1i3O35627 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1i3O35627 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nr1i3O35627 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1i3O35627 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1i3O35627 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1i3O35627 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1i3O35627 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1i3O35627 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nr1i3O35627 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nr1i3O35627 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1i3O35627 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.82■□□□□ 0.6
Nr1i3O35627 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Nr1i3O35627 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nr1i3O35627 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1i3O35627 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1i3O35627 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nr1i3O35627 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nr1i3O35627 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1i3O35627 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nr1i3O35627 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1i3O35627 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1i3O35627 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nr1i3O35627 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1i3O35627 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.81■□□□□ 0.6
Nr1i3O35627 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nr1i3O35627 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1i3O35627 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms