Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfpl4bJ3QPR6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfpl4bJ3QPR6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rfpl4bJ3QPR6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfpl4bJ3QPR6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.15■□□□□ 0.82
Rfpl4bJ3QPR6 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.15■□□□□ 0.82
Rfpl4bJ3QPR6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfpl4bJ3QPR6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfpl4bJ3QPR6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfpl4bJ3QPR6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Mir1668-201ENSMUST00000184114 107 ntBASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Gm29518-201ENSMUST00000190858 372 ntBASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfpl4bJ3QPR6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Tgds-204ENSMUST00000228543 1594 ntBASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Gm28033-201ENSMUST00000184224 96 ntBASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfpl4bJ3QPR6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Gm10418-201ENSMUST00000100943 576 ntBASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Gm17807-201ENSMUST00000186869 298 ntBASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rfpl4bJ3QPR6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfpl4bJ3QPR6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Gm13401-201ENSMUST00000117074 291 ntBASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Gm7461-201ENSMUST00000058918 827 ntBASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rfpl4bJ3QPR6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Gm17808-201ENSMUST00000200859 894 ntBASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Fst-202ENSMUST00000223640 2612 ntBASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfpl4bJ3QPR6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfpl4bJ3QPR6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms