Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
B020004C17RikJ3QP07 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
B020004C17RikJ3QP07 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Mir8112-201ENSMUST00000184382 131 ntBASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.62■□□□□ 0.73
B020004C17RikJ3QP07 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
B020004C17RikJ3QP07 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
B020004C17RikJ3QP07 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
B020004C17RikJ3QP07 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
B020004C17RikJ3QP07 Gm44771-201ENSMUST00000206975 626 ntBASIC19.6■□□□□ 0.73
B020004C17RikJ3QP07 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.6■□□□□ 0.73
B020004C17RikJ3QP07 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
B020004C17RikJ3QP07 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.6■□□□□ 0.73
B020004C17RikJ3QP07 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Gm24589-201ENSMUST00000116692 94 ntBASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
B020004C17RikJ3QP07 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
B020004C17RikJ3QP07 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.73
B020004C17RikJ3QP07 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.58■□□□□ 0.73
B020004C17RikJ3QP07 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.58■□□□□ 0.73
B020004C17RikJ3QP07 Olfr129-201ENSMUST00000122318 993 ntBASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
B020004C17RikJ3QP07 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
B020004C17RikJ3QP07 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
B020004C17RikJ3QP07 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
B020004C17RikJ3QP07 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
B020004C17RikJ3QP07 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms