Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC26.67■■□□□ 1.86
Pcf11G3X9Z4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcf11G3X9Z4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Pcf11G3X9Z4 Gm14464-201ENSMUST00000119658 1254 ntBASIC26.67■■□□□ 1.86
Pcf11G3X9Z4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC26.66■■□□□ 1.86
Pcf11G3X9Z4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcf11G3X9Z4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Pcf11G3X9Z4 Gm27357-201ENSMUST00000183754 135 ntBASIC26.65■■□□□ 1.86
Pcf11G3X9Z4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Pcf11G3X9Z4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcf11G3X9Z4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC26.65■■□□□ 1.86
Pcf11G3X9Z4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
Pcf11G3X9Z4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcf11G3X9Z4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcf11G3X9Z4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC26.64■■□□□ 1.86
Pcf11G3X9Z4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcf11G3X9Z4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcf11G3X9Z4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcf11G3X9Z4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcf11G3X9Z4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Pcf11G3X9Z4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcf11G3X9Z4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC26.64■■□□□ 1.85
Pcf11G3X9Z4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
Pcf11G3X9Z4 Mir770-201ENSMUST00000103252 94 ntBASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Gm11355-201ENSMUST00000121120 306 ntBASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Gm28033-201ENSMUST00000184224 96 ntBASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Pcf11G3X9Z4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 Gm27000-201ENSMUST00000182943 842 ntBASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 Gm27704-201ENSMUST00000185094 107 ntBASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC26.62■■□□□ 1.85
Pcf11G3X9Z4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Gm5828-201ENSMUST00000071842 1860 ntBASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Gm26039-201ENSMUST00000158152 144 ntBASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Iqck-206ENSMUST00000208658 2891 ntBASIC26.61■■□□□ 1.85
Pcf11G3X9Z4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Gm17807-201ENSMUST00000186869 298 ntBASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcf11G3X9Z4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcf11G3X9Z4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcf11G3X9Z4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcf11G3X9Z4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms