Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm28043E0CXC2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28043E0CXC2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28043E0CXC2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28043E0CXC2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28043E0CXC2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Gm13148-201ENSMUST00000118892 745 ntBASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28043E0CXC2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.57■□□□□ 0.4
Gm28043E0CXC2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28043E0CXC2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28043E0CXC2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm28043E0CXC2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms