Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank1D3YZU1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Gm11950-201ENSMUST00000121615 838 ntBASIC15.65■□□□□ 0.1
Shank1D3YZU1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.65■□□□□ 0.1
Shank1D3YZU1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank1D3YZU1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
Shank1D3YZU1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Shank1D3YZU1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.64■□□□□ 0.09
Shank1D3YZU1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.64■□□□□ 0.09
Shank1D3YZU1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Shank1D3YZU1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Gm13401-201ENSMUST00000117074 291 ntBASIC15.63■□□□□ 0.09
Shank1D3YZU1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.63■□□□□ 0.09
Shank1D3YZU1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Gm10566-201ENSMUST00000086739 996 ntBASIC15.63■□□□□ 0.09
Shank1D3YZU1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.63■□□□□ 0.09
Shank1D3YZU1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.63■□□□□ 0.09
Shank1D3YZU1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Shank1D3YZU1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Gm24589-201ENSMUST00000116692 94 ntBASIC15.62■□□□□ 0.09
Shank1D3YZU1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Gm18958-201ENSMUST00000174258 762 ntBASIC15.62■□□□□ 0.09
Shank1D3YZU1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Shank1D3YZU1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Gm11355-201ENSMUST00000121120 306 ntBASIC15.61■□□□□ 0.09
Shank1D3YZU1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.61■□□□□ 0.09
Shank1D3YZU1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Shank1D3YZU1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms