Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn2B2RVW2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn2B2RVW2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Clrn2B2RVW2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.33■□□□□ 0.85
Clrn2B2RVW2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.33■□□□□ 0.85
Clrn2B2RVW2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.33■□□□□ 0.85
Clrn2B2RVW2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn2B2RVW2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clrn2B2RVW2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.33■□□□□ 0.84
Clrn2B2RVW2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clrn2B2RVW2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Gm28033-201ENSMUST00000184224 96 ntBASIC20.32■□□□□ 0.84
Clrn2B2RVW2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn2B2RVW2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Gm17807-201ENSMUST00000186869 298 ntBASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn2B2RVW2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn2B2RVW2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn2B2RVW2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Gm11355-201ENSMUST00000121120 306 ntBASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Gm7461-201ENSMUST00000058918 827 ntBASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn2B2RVW2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn2B2RVW2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn2B2RVW2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn2B2RVW2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn2B2RVW2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.27■□□□□ 0.84
Clrn2B2RVW2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn2B2RVW2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn2B2RVW2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clrn2B2RVW2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clrn2B2RVW2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clrn2B2RVW2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Clrn2B2RVW2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Clrn2B2RVW2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clrn2B2RVW2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.26■□□□□ 0.83
Clrn2B2RVW2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms