Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp42B2RQC2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.51■□□□□ 0.87
Usp42B2RQC2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp42B2RQC2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp42B2RQC2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.51■□□□□ 0.87
Usp42B2RQC2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.51■□□□□ 0.87
Usp42B2RQC2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp42B2RQC2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp42B2RQC2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp42B2RQC2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp42B2RQC2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Usp42B2RQC2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp42B2RQC2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Mir5122-201ENSMUST00000175004 89 ntBASIC20.48■□□□□ 0.87
Usp42B2RQC2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp42B2RQC2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp42B2RQC2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp42B2RQC2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.46■□□□□ 0.87
Usp42B2RQC2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp42B2RQC2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp42B2RQC2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Gm12085-201ENSMUST00000119263 940 ntBASIC20.45■□□□□ 0.86
Usp42B2RQC2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.45■□□□□ 0.86
Usp42B2RQC2 Gm21814-202ENSMUST00000203277 873 ntBASIC20.45■□□□□ 0.86
Usp42B2RQC2 Timm23-208ENSMUST00000226683 750 ntBASIC20.45■□□□□ 0.86
Usp42B2RQC2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp42B2RQC2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Usp42B2RQC2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp42B2RQC2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp42B2RQC2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms